As long as components are SMD flush-mounted stuff, loads we see (+/- ~100G) typically aren't an issue. That said, I do put a little non-conductive epoxy on the edges of big components (like GPS antennas) on my high G rockets to help spread some load. Like heada said, don't cover a baro.
If you core sample a rocket, you really should throw away all the electronics. For normal flying, let 'em rip.
For the MT4, I bet PerfectFlite would be able to give you some guidance on when to worry about it. Looking at their photos, the big cap is the only thing I would worry about for really high G flights.